Skip to content
GitLab
Menu
Projects
Groups
Snippets
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
Aaron Peikert
A Future For Tardis
Commits
3124c3f7
Unverified
Commit
3124c3f7
authored
Jun 02, 2021
by
Aaron Peikert
Browse files
use correct path to singularity
parent
135d1e6b
Changes
1
Hide whitespace changes
Inline
Side-by-side
.batchtools.slurm.singularity.tmpl
View file @
3124c3f7
...
...
@@ -46,5 +46,5 @@ export DEBUGME=<%= Sys.getenv("DEBUGME") %>
## Run R:
## we merge R output with stdout from SLURM, which gets then logged via --output option
singularity
exec
/home/mpib/peikert/
repro-tutorial/reprotutorial
.sif Rscript
-e
'batchtools::doJobCollection("<%= uri %>")'
singularity
exec
/home/mpib/peikert/
a-future-for-tardis_latest
.sif Rscript
-e
'batchtools::doJobCollection("<%= uri %>")'
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment