update readme

README.md

 ### Documentation of Rhythms-Entropy
 
-#### Figures reported in Kosciessa et al. (2019, bioRxiv) are produced in the following scripts:
+#### Figures reported in Kosciessa et al. (2020, PLOS CB) are produced in the following scripts:
 * 1A:     simulations/H_CoarseGrainingExample
 * 1B:     simulations/D_RparamExample
 * 3A:     simulations/D_RparamExample
@@ -13,7 +13,13 @@
 * 8:      empirical/mse/I_FixedRInfluenceOnCoarseMSE
 * 9:      empirical/mse/J_FineScalePSDassociation
 * 10:     empirical/mse/K_overviewPlot_bpMSE_Rate
-* 11A:    empirical/mse/Z_SummaryFigure
+* 11A: 	  simulations/K_transientSlopeMod/K2_calculateSampEn
+* 11B: 	  empirical/ebosc/F_plotEventRate_total
+* 11B: 	  empirical/perirhythm_entropy/G_plotExemplaryAlpha
+* 11C:    empirical/perirhythm_entropy/E1_msePlot_low
+* 11D:    empirical/perirhythm_entropy/E2_msePlot_high
+* 11CD:   empirical/perirhythm_entropy/F_FFT
+* 12A:    empirical/mse/Z_SummaryFigure
 
 
 ----
@@ -22,4 +28,9 @@
 * S3:     simulations/F_saveExemplaryAlphaTraces
 * S4:     simulations/G_PlotFilterResponse
 * S5:     empirical/fft/C2_CBPA_age_condition_plot
-* S6:     empirical/J_FineScalePSDassociation
\ No newline at end of file
+* S6:     empirical/J_FineScalePSDassociation
+* S7:     simulations/J3_complexityMSE_plot
+* S8:     empirical/perirhythm_entropy/B2_InspectRhythmAlignment
+* S9A:    empirical/mse_surrogate/H_plotShuffledTraces
+* S9BC:    empirical/mse_surrogate/E2_MSE_ageDifferences_overview
+* S9DE:    empirical/mse_surrogate/F2_ageDifferences_originalVSshuffled
\ No newline at end of file