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Commit c5006e1a authored by Franziska Koehn's avatar Franziska Koehn
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now, result-table shows requested fields

parent 26d01fdf
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datatypes/xnat_mrScanData.js
View file @ c5006e1a
......@@ -13,6 +13,6 @@
{"label":"Project-ID", "field":"xnat:mrSessionData/PROJECT", "required":true},
{"label":"Subject-ID", "field":"xnat:mrSessionData/SUBJECT_ID", "required":true},
{"label":"Session-ID", "field":"xnat:mrSessionData/SESSION_ID", "required":true},
{"label":"Scan-ID", "field":"xnat:mrScanData/ID", "required":true}
{"label":"Scan-ID", "field":"xnat:mrScanData/ID", "required":true, "key":"id"}
]
}
xnat_search.py
View file @ c5006e1a
......@@ -90,6 +90,13 @@ def get_fields_of_type(type):
except ValueError:
pass
def get_field_label(type, key):
fields = get_fields_of_type(type)
for f in fields:
if "key" in f and f["key"] == key:
return f["label"]
return key
def get_fields_from_labels(labels, type):
result=[]
fields = get_fields_of_type(type)
......@@ -101,20 +108,6 @@ def get_fields_from_labels(labels, type):
break
return result
def get_search_fields():
import json
return json.loads("""[{"label":"type", "field":"xnat:mrScanData/TYPE"},
{"label":"fov_x", "field":"xnat:mrScanData/PARAMETERS_FOV_X"},
{"label":"fov_y", "field":"xnat:mrScanData/PARAMETERS_FOV_Y"},
{"label":"tr", "field": "xnat:mrScanData/PARAMETERS_TR"},
{"label":"te", "field": "xnat:mrScanData/PARAMETERS_TE"},
{"label":"ti", "field": "xnat:mrScanData/PARAMETERS_TI"},
{"label":"flip", "field": "xnat:mrScanData/PARAMETERS_FLIP"},
{"label":"voxel_res_x", "field":"xnat:mrScanData/PARAMETERS_VOXELRES_X"},
{"label":"voxel_res_y", "field":"xnat:mrScanData/PARAMETERS_VOXELRES_Y"},
{"label":"voxel_res_z", "field":"xnat:mrScanData/PARAMETERS_VOXELRES_Z"}
]""")
def get_query_methods():
return ["AND", "OR"]
......
xnat_search_gui.py
View file @ c5006e1a
......@@ -63,7 +63,7 @@ class XnatSearchApp(gtk.Window):
else:
self.results = query_results
self.vbox_results.show_data(self.results)
self.vbox_results.show_data(self.results, root_type)
self.statusbar.push(0, "%s Results"%len(self.results))
self.chart_view.update_chart(self.results)
......
xnatgtk/query_view.py
View file @ c5006e1a
......@@ -21,7 +21,7 @@ class QueryView(gtk.VBox):
self.entry_host.set_text(new_host)
def __send_query(self):
self.emit("send-query", self.host, self.credentials, self.combobox.get_selected_item(), self.treeView_search.get_query(), self.treeView_fields.get_selected_fields())
self.emit("send-query", self.host, self.credentials, self.combobox.get_selected_item(), self.treeView_search.get_query(self.combobox.get_selected_item()), self.treeView_fields.get_selected_fields())
def __init__(self, *args, **kwargs):
super(QueryView, self).__init__(*args, **kwargs)
......@@ -350,10 +350,10 @@ class TreeViewQuery(gtk.TreeView):
import xnat_search
self.operators = xnat_search.get_operators()
def get_query(self):
def get_query(self, type):
import xnat_search
search_fields = xnat_search.get_search_fields()
search_fields = xnat_search.get_fields_of_type(type)
query = []
def add_next_to_querry(iter):
......
xnatgtk/results_view.py
View file @ c5006e1a
......@@ -2,8 +2,8 @@ import gtk
class ResultsDownloadView(gtk.VBox):
def show_data(self, results):
self.treeViewResults.show_data(results)
def show_data(self, results, root_type):
self.treeViewResults.show_data(results, root_type)
def __init__(self, *args, **kwargs):
super(ResultsDownloadView, self).__init__(*args, **kwargs)
......@@ -19,20 +19,17 @@ class ResultsDownloadView(gtk.VBox):
buttonBox_download = gtk.HButtonBox()
self.pack_end(buttonBox_download,expand=False, fill=False)
results_tree_view_store = self.treeViewResults.store
def event_clicked_download(button, *_):
import gobject
import xnat_search
enabled = (d for d in results_tree_view_store if d[0])
enabled = (d for d in self.treeViewResults.store if d[0])
for d in enabled:
def stop_spinner(_row):
_row[7] = False # Hide spinner
_row[2] = False # Hide spinner
_row[0] = False # Checkbox to false
d[8] = 0
d[7] = True # Show Spinner
xnat_search.download_async(d[6], button.destination, cb=stop_spinner, cb_args=(d,))
d[3] = 0
d[2] = True # Show Spinner
xnat_search.download_async(d[1], button.destination, cb=stop_spinner, cb_args=(d,))
def event_clicked_toggle_selection(*_):
self.treeViewResults.toggle_selection()
......@@ -73,23 +70,26 @@ class ButtonDownloadResults(gtk.Button):
class TreeViewResults(gtk.TreeView):
store = []
def __init__(self):
import gobject
super(TreeViewResults, self).__init__()
self.create_columns()
self.store = gtk.ListStore(bool, str, str, str, str, str, gobject.TYPE_PYOBJECT, bool, int)
self.set_model(self.store)
self.show_data([], None)
gobject.timeout_add(150, self.move_spinners)
def move_spinners(self):
for r in self.store:
if r[7]: # if spinner is visible
r[8] += 1
if r[2]: # if spinner is visible
r[3] += 1
return True
def create_columns(self):
def create_columns(self, column_labels):
for c in self.get_columns():
self.remove_column(c)
def callback_toggled(cellrenderertoggle, path_string, col, *_):
it = self.store.get_iter_from_string(path_string)
......@@ -106,48 +106,50 @@ class TreeViewResults(gtk.TreeView):
self.append_column(column)
renderer = gtk.CellRendererSpinner()
column = gtk.TreeViewColumn("", renderer, active=7, pulse=8)
column = gtk.TreeViewColumn("", renderer, active=2, pulse=3)
self.append_column(column)
column = gtk.TreeViewColumn("Project-ID", gtk.CellRendererText(), text=1)
column.set_sort_column_id(1)
column.set_resizable(True)
self.append_column(column)
for i,cl in enumerate(column_labels, start=4):
column = gtk.TreeViewColumn(cl, gtk.CellRendererText(), text=i)
column.set_sort_column_id(i)
column.set_resizable(True)
self.append_column(column)
column = gtk.TreeViewColumn("Subject-ID", gtk.CellRendererText(), text=2)
column.set_sort_column_id(2)
column.set_resizable(True)
self.append_column(column)
def toggle_selection(self):
for row in self.store:
row[0] = not row[0]
column = gtk.TreeViewColumn("Session-ID", gtk.CellRendererText(), text=3)
column.set_sort_column_id(3)
column.set_resizable(True)
self.append_column(column)
def show_data(self, data, root_type):
import gobject
if data == []:
self.create_columns([])
return
column = gtk.TreeViewColumn("Scan-ID", gtk.CellRendererText(), text=4)
column.set_sort_column_id(4)
column.set_resizable(True)
self.append_column(column)
column = gtk.TreeViewColumn("Scan-Type", gtk.CellRendererText(), text=5)
column.set_sort_column_id(5)
column.set_resizable(True)
self.append_column(column)
keys = data.headers()
def toggle_selection(self):
for row in self.store:
row[0] = not row[0]
model_columns = []
model_columns.append(bool) # 0 is selected (for download selection)
model_columns.append(gobject.TYPE_PYOBJECT) # 1 query result
model_columns.append(bool) # 2 is spinner visible
model_columns.append(int) # 3 spinner pulse
for k in keys:
model_columns.append(str)
self.store = gtk.ListStore(*model_columns)
def show_data(self, data):
self.store.clear()
for d in data:
self.store.append( [ True,
d['xnat_mrsessiondata_project'],
d['xnat_mrsessiondata_subject_id'],
d['xnat_mrsessiondata_session_id'],
d['id'],
d['type'],
d,
False,
0
])
result = []
result.append(True)
result.append(d)
result.append(False)
result.append(0)
for k in keys:
result.append(d[k])
self.store.append(result)
import xnat_search
keys_ = list(xnat_search.get_field_label(root_type, key) for key in keys)
self.create_columns(keys_) # TODO labels
self.set_model(self.store)
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