Commits · master · Michael Krause / freesurfer-longitudinal-pipeline

Mar 01, 2020
- Do not rely on global LIBDIR · 24f0bbb4
  Michael Krause authored Mar 01, 2020
  
  24f0bbb4
Oct 02, 2017
- updated README · ee479f43
  Michael Krause authored Oct 02, 2017
  
  ee479f43
- fix colored output and wording · fa166ae9
  Michael Krause authored Oct 02, 2017
  
  fa166ae9
- stage3: typo in depend string · c9f8573f
  Michael Krause authored Oct 02, 2017
  
  c9f8573f
- stage3: fix detection of active stage2 · f37e3bc7
  Michael Krause authored Oct 02, 2017
  
  f37e3bc7
- handle empty dependencies for qsub · 1970bac2
  Michael Krause authored Oct 02, 2017
  
  1970bac2
- make FREESURFER_HOME configurable · c4d049b0
  Michael Krause authored Oct 02, 2017
  
  c4d049b0
Jun 23, 2014
- main: use global source · 9534b03b
  Michael Krause authored Jun 23, 2014
  
  9534b03b
Jun 20, 2014
- tiny readme changes · 279bdf82
  Michael Krause authored Jun 20, 2014
  
  279bdf82
- better syntax highlighting · 3b40ecd7
  Michael Krause authored Jun 20, 2014
  
  3b40ecd7
- Typo in Readme.md · 10b31d41
  Michael Krause authored Jun 20, 2014
  
  10b31d41
- add: verbosity++ in the config section · 819be850
  Michael Krause authored Jun 20, 2014
  
  819be850
- fix: another go at the dependency issue in stage2 · cc09cb15
  Michael Krause authored Jun 20, 2014
  
  cc09cb15
Jun 11, 2014
- fix: remove whole subj dir on re-submit · 89be185f
  Michael Krause authored Jun 11, 2014
  
  89be185f
Jun 10, 2014
- cosmetics, tests seem fine · 234841d8
  Michael Krause authored Jun 10, 2014
  
  234841d8
Jun 06, 2014
- WIP: handle missing timepoints in stage2 · 838ce00b
  mk authored Jun 06, 2014
  
  838ce00b
- more consistent messages, cosmetics · 194d6eab
  mk authored Jun 06, 2014
  
  194d6eab
- WIP: dependency problem in stage2.. · a2cb7b60
  Michael Krause authored Jun 06, 2014
  
  a2cb7b60
Jun 02, 2014
- test: cosmetics · 1389feb4
  Michael Krause authored Jun 02, 2014
  
  1389feb4
May 28, 2014
- fix: depencies · 600dae13
  Michael Krause authored May 28, 2014
  
  600dae13
May 26, 2014
- Merge branch 'master' of gitlab.mpib-berlin.mpg.de:krause/freesurfer-longitudinal-pipeline · 76903fc0
  Michael Krause authored May 26, 2014
  
  76903fc0
- fix: main.sh · 3c753250
  Michael Krause authored May 26, 2014
```
    + source probably needs a seperate line
    + also wait for each stage (this is hacky, I know)
```
  3c753250
- Update Readme.md · f04d59c9
  Michael Krause authored May 26, 2014
  
  f04d59c9
- typo · 47068692
  Michael Krause authored May 26, 2014
  
  47068692
- test case: · 38bfa831
  Michael Krause authored May 26, 2014
```
    $ "make"  to run
    $ "make clean" to stop and clean up
    $ uses "qdel all", you have been warned
```
  38bfa831
- working rewrite · b9fcbe97
  Michael Krause authored May 26, 2014
  
  b9fcbe97
- fix: re-use previously assigned JOB_PREFIX · 8b05db01
  Michael Krause authored May 26, 2014
  
  8b05db01
May 15, 2014
- make testing easier · 231aafcd
  Michael Krause authored May 15, 2014
  
  231aafcd
- some refactoring and added IGNORE_MISSING option · ade7a394
  Michael Krause authored May 15, 2014
  
  ade7a394
- import loose version and refactor to new structure · e62589ea
  Michael Krause authored May 15, 2014
  
  e62589ea
- initial · e1e0ed2b
  Michael Krause authored May 15, 2014
  
  e1e0ed2b