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CITemplates
Sharing Artifacts
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effddf7c
Commit
effddf7c
authored
Nov 06, 2020
by
Michael Krause
🎉
Browse files
Do not download nifti images
parent
3c8c2316
Pipeline
#7665
passed with stages
in 43 seconds
Changes
1
Pipelines
2
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.gitlab-ci.yml
View file @
effddf7c
...
...
@@ -11,8 +11,7 @@ datalad:
-
git config --global user.email "ci@git.mpib-berlin.mpg.de"
-
datalad install ///openfmri/ds000001
# skeleton for ds000001
-
mv ds000001 data
-
datalad get data/sub-01
# validator needs at least one subject folder
-
datalad get data/sub-*/func/*.tsv
# static list of all known
-
datalad get data/sub-*/*/*.tsv
# static list of all known
artifacts
:
paths
:
-
data
...
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@@ -25,7 +24,8 @@ bidsvalidator:
entrypoint
:
[
"
"
]
# we want to run a shell script in the container
script
:
-
mkdir report
# pass on the report folder later
-
bids-validator --json data/ >> report/report.json || exit
0
# do not abort the pipeline if the validation fails
-
bids-validator --ignoreNiftiHeaders --ignoreSymlinks --json data/ >> report/report.json || exit
0
# do not abort the pipeline if the validation fails
artifacts
:
paths
:
-
report
...
...
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