create relative paths [when scripts are run]

StateSwitch/Z_testBehavioralPresentation.m

  % This script can be used to try out the experiment behaviorally (defaults to word version)
 
-%% specify psychtoolbox path
-addpath(genpath('/Users/kosciessa/multi-attribute-task/Psychtoolbox'));
-
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
 %% enter subject ID & task variant %%
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
@@ -20,14 +17,21 @@ disp(['Continuing with subject ',setup.subj, ' and ', setup.task, ' task version
 
 %% add required paths
 
-pn.root = ['/Users/kosciessa/multi-attribute-task/'];
+currentFile = mfilename('fullpath');
+[pathstr,~,~] = fileparts(currentFile);
+cd(fullfile(pathstr))
+pn.root = pwd;
+
+pn.CB       = fullfile(pn.root, 'checker'); addpath(pn.CB);
+pn.MAT      = fullfile(pn.root, 'dotsx'); addpath(pn.MAT);
+pn.SS       = fullfile(pn.root, 'StateSwitch'); addpath(pn.SS);
+pn.Stroop   = fullfile(pn.root, 'Stroop'); addpath(pn.Stroop);
+addpath(genpath(fullfile(pn.root, 'functions')));
+addpath(genpath(fullfile(pn.root, 'helper')));
+
+%% specify psychtoolbox path
 
-pn.CB       = [pn.root, 'checker',filesep]; addpath(pn.CB);
-pn.MAT      = [pn.root, 'dotsx',filesep]; addpath(pn.MAT);
-pn.SS       = [pn.root, 'StateSwitch',filesep]; addpath(pn.SS);
-pn.Stroop   = [pn.root, 'Stroop',filesep]; addpath(pn.Stroop);
-addpath(genpath([pn.root, 'functions',filesep]));
-addpath(genpath([pn.root, 'helper',filesep]));
+addpath(genpath(fullfile(pn.root, 'Psychtoolbox')));
 
 %% create results directory
 

TaskPipeline_EEG.m

@@ -17,18 +17,18 @@ disp(['Continuing with subject ',setup.subj, ' and ', setup.task, ' task version
 
 %% add required paths
 
-if ispc 
-    pn.root = ['C:',filesep,'Users',filesep,'eeg',filesep,'Desktop',filesep,'StateSwitchEEG',filesep,'C_Paradigm',filesep];
-else
-    pn.root = [filesep,'Volumes',filesep,'LNDG',filesep,'stateSwitch',filesep,'B_paradigm',filesep,'StateSwitchEEG',filesep,'C_Paradigm_170922',filesep];
-end
+currentFile = mfilename('fullpath');
+[pathstr,~,~] = fileparts(currentFile);
+cd(fullfile(pathstr))
+pn.root = pwd;
+
+pn.CB       = fullfile(pn.root, 'checker'); addpath(pn.CB);
+pn.MAT      = fullfile(pn.root, 'dotsx'); addpath(pn.MAT);
+pn.SS       = fullfile(pn.root, 'StateSwitch'); addpath(pn.SS);
+pn.Stroop   = fullfile(pn.root, 'Stroop'); addpath(pn.Stroop);
+addpath(genpath(fullfile(pn.root, 'functions')));
+addpath(genpath(fullfile(pn.root, 'helper')));
 
-pn.CB       = [pn.root, 'checker',filesep]; addpath(pn.CB);
-pn.MAT      = [pn.root, 'dotsx',filesep]; addpath(pn.MAT);
-pn.SS       = [pn.root, 'StateSwitch',filesep]; addpath(pn.SS);
-pn.Stroop   = [pn.root, 'Stroop',filesep]; addpath(pn.Stroop);
-addpath(genpath([pn.root, 'functions',filesep]));
-addpath(genpath([pn.root, 'helper',filesep]));
 if ispc
     addpath(['C:',filesep,'toolbox',filesep,'Psychtoolbox']); % PTB 3.0.11
 else

TaskPipeline_MRI.m

@@ -17,25 +17,24 @@ disp(['Continuing with subject ',setup.subj, ' and ', setup.task, ' task version
 
 %% add required paths
 
+currentFile = mfilename('fullpath');
+[pathstr,~,~] = fileparts(currentFile);
+cd(fullfile(pathstr))
+pn.root = pwd;
+
+pn.CB       = fullfile(pn.root, 'checker'); addpath(pn.CB);
+pn.MAT      = fullfile(pn.root, 'dotsx'); addpath(pn.MAT);
+pn.SS       = fullfile(pn.root, 'StateSwitch'); addpath(pn.SS);
+pn.Stroop   = fullfile(pn.root, 'Stroop'); addpath(pn.Stroop);
+addpath(genpath(fullfile(pn.root, 'functions')));
+addpath(genpath(fullfile(pn.root, 'helper')));
+
 if ispc
-    pn.root = ['D:',filesep,'Dokumente und Einstellungen',filesep,'guest',filesep,'Desktop',filesep,'StateSwitchMR',filesep,'C_Paradigm',filesep];
+    addpath(['C:',filesep,'toolbox',filesep,'Psychtoolbox']); % PTB 3.0.11
 else
-    disp('Setup no supported.');
-    pn.root = ['/Users/kosciessa/Desktop/StateSwitchMR/C_Paradigm/'];
+    addpath(genpath('/Users/Shared/Psychtoolbox/')); % PTB 3.0.13 (160606)
 end
 
-pn.CB       = [pn.root, 'checker',filesep]; addpath(pn.CB);
-pn.MAT      = [pn.root, 'dotsx',filesep]; addpath(pn.MAT);
-pn.SS       = [pn.root, 'StateSwitch',filesep]; addpath(pn.SS);
-pn.Stroop   = [pn.root, 'Stroop',filesep]; addpath(pn.Stroop);
-addpath(genpath([pn.root, 'functions',filesep]));
-addpath(genpath([pn.root, 'helper',filesep]));
-% if ispc
-%     addpath(['C:',filesep,'toolbox',filesep,'Psychtoolbox']); % PTB 3.0.11
-% else
-%     addpath(genpath('/Users/Shared/Psychtoolbox/')); % PTB 3.0.13 (160606)
-% end
-
 %% create results directory
 
 setup.subjectsPath = [pn.root,filesep,'data',filesep, setup.subj '_MR_' datestr(now, 'yymmdd_HHMM') filesep]; mkdir(setup.subjectsPath);